.. sknrf documentation introduction file .. figure:: ../_images/PNG/sknrf_logo.png :width: 500 pt :align: center Linux ===== Environment Variables --------------------- .. tip:: Replace $USER with your local user folder. .. tip:: Save settings in the user environment (~/.bashrc), not the system environment (~/.bash_profile) .. tip:: Run mv ~/anaconda3/bin/qtpaths ~/anaconda3/bin/qtpaths-qt5 to avoid qt conflict with KDE user login process .. code-block:: bash # Clang export LLVM_INSTALL_DIR=`llvm-config-6.0 --prefix` # Qt 5.12.0 export QTDIR="$HOME/Qt/5.12.2/gcc_64" export QMAKESPEC="linux-clang" export QT_PATH="$QTDIR/bin" export QT_LD_LIBRARY_PATH="$QTDIR/lib:$QTDIR/plugins/platforms" # ADS # export HPEESOF_DIR="/ADS_2016/" # export COMPL_DIR="$HPEESOF_DIR" # export SIMARCH="linux_64" # export ADS_PATH="$HPEESOF_DIR/bin/$SIMARCH:$HPEESOF_DIR/bin:$HPEESOF_DIR/lib/$SIMARCH:$HPEESOF_DIR/circuit/lib.$SIMARCH:$HPEESOF_DIR/adsptolemy/lib.$SIMARCH" # Anaconda 4.5.11 export CONDA_PYTHONPATH="$CONDA_PREFIX/lib" export CPLUS_INCLUDE_PATH="$CONDA_PREFIX/include/python3.6m:$CPLUS_INCLUDE_PATH" # Scikit-Nonlinear export SRC_DIR="$HOME/repos/ci-cpp-python-dev" # PyCharm export PYDEVD_PYQT_MODE="pyside" # PATH echo $PATH > $CONDA_PREFIX/etc/conda/PATH.txt echo $LD_LIBRARY_PATH > $CONDA_PREFIX/etc/conda/LD_LIBRARY_PATH.txt echo $PYTHONPATH > $CONDA_PREFIX/etc/conda/PYTHONPATH.txt export PATH="$QT_PATH:$PATH" export LD_LIBRARY_PATH="$QT_LD_LIBRARY_PATH:$LD_LIBRARY_PATH" export PYTHONPATH="$CONDA_PYTHONPATH:$PYTHONPATH" Installation ------------ Prerequisites ~~~~~~~~~~~~~ * Setup root account * Disable automatic login * Install updates Enable Port Forwarding in VirtualBox ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ VirtualBox->Settings->Network->Adapter1->Advanced->Port Forwarding * Protocol: TCP * Host IP: 127.0.0.1 * Host Port: 2222 * Guest IP: 10.0.2.15 * Guest Port: 22 Jenkins ~~~~~~~ Create Jenkins Group/User on Remote machine (Linux) .. code-block:: bash >>>sudo groupadd jenkins >>>sudo useradd -m -s /bin/bash -g jenkins jenkins >>>sudo passwd jenkins >>>sudo usermod -a -G jenkins jenkins Repeat the SSH step for jenkins USER SSH ~~~ Check the status of the sshd server .. code-block:: bash >>>sudo apt install openssh-server >>>sudo systemctl status ssh >>>q Generate Keys .. code-block:: bash >>>ssh-keygen -t rsa # Default location, no passphrase Remove existing known hosts from Remote Machine .. code-block:: bash >>> ssh-keygen -R [hostname]:port >>> sudo ssh-keygen -R hostname]:port Connect from a Remote Machine .. code-block:: bash >>>ssh-copy-id -p PORT USER@ADDRESS // add local user to authorized_keys on host >>>sudo ssh-copy-id -p PORT USER@ADDRESS // add root user to authorized_keys on host >>>ssh -p PORT USER@ADDRESS >>>sftp -P PORT USER@ADDRESS >>>sudo ssh -p PORT USER@ADDRESS >>>sudo sftp -P PORT USER@ADDRESS C++ Compiler ~~~~~~~~~~~~ Install the developer tools: .. code-block:: bash >>> sudo apt-get update >>> sudo apt-get upgrade >>> sudo apt install build-essential .. code-block:: bash >>> gcc -v >>> make -v Git ~~~ Install Git. .. code-block:: bash >>> sudo apt install git >>> git config --global core.autocrlf input Test the installlation from the terminal: .. code-block:: bash >>> which git libClang ~~~~~~~~ Install Clang and libClang .. code-block:: bash >>> sudo apt install llvm-6.0 >>> sudo apt install clang >>> sudo apt install clang-6.0 >>> sudo apt install libclang-6.0-dev >>> sudo apt install libxslt-dev >>> sudo apt install mesa-common-dev >>> sudo apt install libgl1-mesa-glx >>> sudo apt install libgl1-mesa-dev >>> sudo apt install libglib2.0-0 >>> sudo apt install wget Test the installlation from the terminal .. code-block:: bash >>> export LLVM_INSTALL_DIR=`llvm-config-6.0 --prefix` >>> which clang-6.0 >>> which clang Perl ---- Should be pre-installed. Test the installation from the terminal: .. code-block:: bash >>> which perl NI VISA Libraries ----------------- Install the `National Instruments VISA libraries 15 `_. - Install the Visa libraries .. code-block:: bash >>> cd ~/Downloads >>> sudo mkdir /mnt/visa >>> sudo mount -o loop NI-VISA*.iso /mnt/visa/ >>> cd /mnt/visa >>> sudo ./INSTALL >>> sudo umount /mnt/visa >>> sudo rmdir /mnt/visa Test the installlation from the terminal: .. code-block:: bash >>> niiotrace Cairo ~~~~~ sudo apt install libcairo2-dev sudo apt install libgirepository1.0-dev CMAKE ----- Install Cmake. .. code-block:: bash >>> sudo apt install cmake >>> # We require CMake >= 3.12 due to the improved Python support >>> wget https://github.com/Kitware/CMake/releases/download/v3.13.4/cmake-3.13.4-Linux-x86_64.tar.gz >>> tar xvf cmake-3.13.4-Linux-x86_64.tar.gz Test the installlation from the terminal: .. code-block:: bash >>> export CMAKE_PATH="$HOME/cmake-3.13.4-Linux-x86_64/bin" >>> export PATH="$CMAKE_PATH:$PATH" >>> which cmake >>> cmake --version Qt ~~ Install using the online installer. Select the version of Qt that you would like to install (eg. Qt 5.12.2) .. code-block:: bash >>> chmod +x qt-unified-linux-x64-3.0.5-online.run >>> ./qt-unified-linux-x64-3.0.5-online.run Test the installlation from the terminal: .. code-block:: bat >>> export QTDIR="$HOME/Qt/5.12.2/gcc_64" >>> export QMAKESPEC="linux-clang" >>> export QT_PATH="$QTDIR/bin" >>> export PATH="$QT_PATH:$PATH" >>> which qmake Anaconda -------- Download and install `Anaconda for Python3 Linux `_. .. code-block:: bash >>> /bin/bash >>> bash Anaconda3-5.3.1-Linux-x86_64.sh - Press ENTER To install to user/anaconda3 folder Test the installlation from the terminal: .. code-block:: bash >>> /bin/bash >>> which conda Python 3.6 ---------- Create a Python 3.4 Anaconda virtual environment. .. code-block:: bash >>> conda create -n py36 python=3.6 anaconda >>> conda activate py36 >>> conda uninstall qt Test the installlation from the terminal: .. code-block:: bash >>> which python >>> which cmake >>> whcih qmake PyVisa ------ Install PyVisa using pip as follows: .. code-block:: bat >>>> python -m pip install -U pyvisa Test the installlation from the terminal: .. code-block:: bat >>> python >>> import visa Shiboken/PySide --------------- Build Shiboken/Shiboken Generator/PySide2 from source as follows: .. code-block:: bash >>> git clone --recursive https://code.qt.io/pyside/pyside-setup >>> cd pyside-setup >>> git checkout 5.12.2 >>> git submodule update --init >>> python setup.py build --qmake=$QT_DIR/bin/qmake --jobs=4 >>> python setup.py install --qmake=$QT_DIR/bin/qmake --jobs=4 Test the installlation from the terminal: .. code-block:: bash >>> which shiboken2 >>> which pyside2-rcc >>> which pyside2-uic PyTorch ~~~~~~~ Compile PyTorch from sorce as follows: .. code-block:: bash >>> conda install numpy pyyaml mkl mkl-include setuptools cmake cffi typing >>> >>> # Add LAPACK support for the GPU if needed >>> conda install -c pytorch magma-cuda90 # or [magma-cuda80 | magma-cuda92 | magma-cuda100 ] depending on your cuda version >>> python setup.py install develop Test the installlation from the terminal: .. code-block:: bash >>> python >>> import torch Matplotlib ~~~~~~~~~~ Install Matplotlib using conda as follows: .. code-block:: bash >>> conda install matplotlib --no-deps Test the installlation from the terminal: .. code-block:: bash >>> python >>> import matplotlib Scikit-RF ~~~~~~~~~ Install Scikit-RF using conda as follows: .. code-block:: bash >>> conda install scikit-rf --no-deps Test the installlation from the terminal: .. code-block:: bash >>> python >>> import skrf Parmiko ~~~~~~~ Install Parmiko using conda as follows: .. code-block:: bash >>> conda install paramiko Test the installation from the terminal: .. code-block:: bash >>> python >>> import paramiko Toposort ~~~~~~~~ Install Toposort using pip as follows: .. code-block:: bash >>> pip install toposort Test the installation from the terminal: .. code-block:: bash >>> python >>> import toposort Nose-Exclude ~~~~~~~~~~~~ Install Nose-Exclude using pip as follows: .. code-block:: bash >>> pip install nose-exclude Test the installation from the terminal: .. code-block:: bash >>> python >>> import nose_exclude Sphinx Bootstrap Theme ~~~~~~~~~~~~~~~~~~~~~~ Install Sphinx Bootstrap Theme using pip as follows: .. code-block:: bash >>> pip install sphinx_bootstrap_theme Test the installation from the terminal: .. code-block:: bash >>> python >>> import sphinx_bootstrap_theme PyLint ~~~~~~ Install PyLint using conda as follows: .. code-block:: bash >>> conda install pylint Test the installation from the terminal: .. code-block:: bash which pylint Radon ~~~~~ Install radon using pip as follows: .. code-block:: bash >>> pip install radon Test the installation from the terminal: .. code-block:: bash which radon